Fully inspect the timing belt. Check the oil. You can remove the vacuum pump and spin the oil pump to pre-lube the engine without actually needing to turn the engine over.
FYI, you'll have to modify the trans tunnel a bit to get the 5 speed to fit in. Nothing major, but just something to consider.
This will be a sweet build! That fox looks clean! All that bracketry on the backside of the motor looks like a clustered mess to me though! Is that a generator instead of an alternator? That is the first time I have seen one of these motors with that layout!
That old Audi looks so cool, a definite head turner. It irks me that they're FWD though.