Clear fuel lines going from filter to the pump, when hooked up to the tank? How's the air look? Don't even worry about what gets to the injectors until you have a good flow going through the pump and heading back to the tank.If it works great when bottle fed, but when you connect it to the tank it won't run? Hard to tell if the fuel is full of air due to a leak, filter vent not closed/sealed. or a fuel line restriction, it could be a clogged intank screen.
There should be check valves on the send and return lines back by the tank. When I had a similar problem the check valve on my send line was bad (fuel flowed freely both ways). I replaced it with a generic one from ebay as I couldn't find an oem replacement. A mighty vac can be your best friend to prime things and make sure you get all the air out though, form both the lines and the pump.
hmmmm would speculating that removing the accumulator and fuel pump from the gas setup removed the check valve as well seem true?