1. so the callipers were not shot, it turns out the when you bleed the rear breaks on the car, the bleed screw is only about halfway up the piston, so they are still half full of air. We took the callipers off of the carriers and used a 2x4 and a piece of steel to bleed them with the bleed screws facing up, and what do you know, there was air. So to make a long-ish story short, I now have brakes.
2. there is a brown wire that looks like it had been added for a stereo, of something, the end of it had been tweaker-ized, but it is actually the ground for the fuse box, and everything else in the dash, it had apparently been sitting on the frame, and grounding there, but when I was working on something else I moved it out of the way, and so it was no longer grounding. I have now grounded it properly and everything is working again.
thanks everyone for your help and suggestions.