You can use your dial pump timing gauge through the #1 injector hole. You will need to extend the shaft to reach TDC, I very tightly taped a straight piece of wire/rod to get the length. Next you have to hold the gauge above and into the hole securly. You will get VERY ACCURATE results as to what TDC is and make a mark on the flywheel.
I would swear that on my last transmission removal (98Mk3 GTi ABA)that there were 6 bolts (stretch bolts per VW) retaining the flywheel to the crankand they were not evenly spaced, so you could only install it one way.Perhaps that was only in the later iterations of that block, though...-Brad