If 4th is the only different gear as between your NA and the TD van transmissions, then I guess the big issue is highway cruising speed. The secondary issue would be how wide a gap you can tolerate between 3rd and 4th gear ratios.
There's a T3 transmission calculator at
http://www.syncro.ca/tiresize/Assuming you have stock sized tires (and assuming that trans calculator is accurate), then at 4000 rpm, I think you will be driving about 65 mph with your present transmission.
The factory 1.6 TD van would have been travelling 71 mph at that same 4000 rpm.
My van does that same 71 mph at about 3600 rpm, by a combination of AAN waterboxer 4-speed and 27.5" tall tires. Very much less racket at highway speeds.
I run a 1.9 TD (AAZ) in this van, so I'm not sure if a 1.6TD van would drive as well with my high 4th gear ratio. The extra 300 cc in the AAZ may make the difference, as well as a couple of pump tweaks and a larger turbo on this engine.
Hopefully Mr. Brickyard and libbybapa will chime in, as they both run 1.6TD vans.