Yes 180 out would have been my first guess too but I actualy posted here about that when I was putting it together and I did line the drive lug on the cam plate with the keyway slot on the main shaft and it was right. That worried me too at the time and I asked here about it to make sure I had it right. I made sure the vane pump was free and not binding when Iassembled it, made sure the throttle shaft was in the same place as it was originaly with the index marks and didn't have any problems putting the return springs back on after I figured out putting the nut on a little helped a lot with that. I practiced on another pump I had first to get more familiar with the insides and didn't have any problems at all and the way it squirted fuel on the vise test made me feel it was fine. I've double checked the timing and I have it on 1.02 right now, was 1.0 on the first try and makes no difference. I even pushed it about 1/4 in. advance once and still no difference other than rattling more when firing a short time.
Hmmmm.... interesting.When you crack the fuel lines at the injectors are you getting any fuel at all? Is the engine popping like it's seeing a little fuel, or completely dead.